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  5. Cz12g19130.t1

Cz12g19130.t1


Description : Clp protease proteolytic subunit /Translocation-enhancing protein TepA [Interproscan].


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g19130.t1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre03.g204350 30787499, CLPR4 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder
Cre06.g299650 30779921, CLPR6 ATP-dependent Clp protease proteolytic subunit 6,... 0.03 OrthoFinder
Cre07.g331500 30774567, CLPR3 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder
Cre12.g486100 30791972, CLPP5 Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder
Cre12.g500950 30792003, CLPP4 Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder
Cre16.g682900 30778138, CLPR2 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder
EOD08646 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
OT_09G02930.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Sro178_g078080.1 Contig275.g3533 Protease proteolytic subunit 0.02 OrthoFinder
Sro20_g014090.1 Contig2954.g23439 Protease proteolytic subunit 0.03 OrthoFinder
Sro22_g015350.1 Contig426.g5759 Protease proteolytic subunit 0.04 OrthoFinder
Transcript_contig_56182 56182 Clp protease proteolytic subunit... 0.02 OrthoFinder
Transcript_contig_56330 56330 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0018s0103.1 32898503 Clp protease proteolytic subunit... 0.02 OrthoFinder
lcl|BLLF01000493.1_cds_GFH12345.1_6822 HaLaN_08009, GFH12345 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01006507.1_cds_GFH32317.1_26794 HaLaN_31518, GFH32317 ATP-dependent Clp protease proteolytic subunit 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 11 98
No external refs found!