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  5. Cz12g16250.t1

Cz12g16250.t1


Description : ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal domain; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0002773 (OrthoFinder) Phylogenetic Tree(s): OG0002773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g16250.t1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.46 tig00022075_g23607.t1 26S proteasome regulatory subunit 6B homolog... 0.04 OrthoFinder
Cre09.g402450 30780718 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder
EOD31689 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.06 OrthoFinder
OT_09G02280.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
PTI_06G04080.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.05 OrthoFinder
Sro1509_g278540.1 Contig198.g2309 Proteasome regulatory subunit 6B 0.08 OrthoFinder
TP12G01440.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.05 OrthoFinder
Transcript_contig_90026 90026 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
Vocar.0008s0375.1 32897106 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.03 OrthoFinder
XM_002502156.1 MICPUN_108299, 108299 Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50984.1_814 PRW50984 26S protease regulatory subunit 6B-like protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 83 138
IPR041569 AAA_lid_3 352 394
IPR003959 ATPase_AAA_core 196 329
No external refs found!