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  5. Cz12g12300.t1

Cz12g12300.t1


Description : Ribosomal protein L29/L35 [Interproscan].


Gene families : OG_01_0003855 (OrthoFinder) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g12300.t1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.79 tig00000241_g20941.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cre14.g617900 30776584, RPL35 Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder
Dusal.0936s00001.1 33189602 Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
EOD14796 No alias Ribosomal protein L29/L35 [Interproscan]. 0.16 OrthoFinder
OT_05G01490.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.17 OrthoFinder
PTI_06G01310.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.3 OrthoFinder
Sro1394_g268940.1 Contig598.g7460 60S ribosomal protein L35 0.33 OrthoFinder
SymbC1.scaffold356.4 356.4 Ribosomal protein L29/L35 [Interproscan]. 0.1 OrthoFinder
TP12G02050.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.32 OrthoFinder
Vocar.0001s1458.1 32885943 Ribosomal protein L29/L35 [Interproscan]. 0.11 OrthoFinder
XM_002507650.1 MICPUN_107597, 107597 Ribosomal protein L29/L35 [Interproscan]. 0.22 OrthoFinder
XM_003056132.1 MicpuC2_49485, 49485 60S ribosomal protein L35 (RPL35) 0.14 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20803.1_5002 PRW20803 60S ribosomal L35-like 0.14 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492667.1_9360 KAA8492667 60S ribosomal protein L35 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!