Cpa|evm.model.tig00001086.29 (tig00001086_g6863.t1)

Aliases : tig00001086_g6863.t1

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.large subunit

Gene families : OG_01_0007036 (OrthoFinder) Phylogenetic Tree(s): OG0007036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001086.29
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method	Actions
Vocar.0006s0380.1	32893874	DNA-directed RNA polymerase III subunit RPC4 [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005666	RNA polymerase III complex	IEA	Interproscan
CC	GO:0030880	RNA polymerase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004659	prenyltransferase activity	IEP	Enrichment
BP	GO:0006643	membrane lipid metabolic process	IEP	Enrichment
BP	GO:0006665	sphingolipid metabolic process	IEP	Enrichment
BP	GO:0006672	ceramide metabolic process	IEP	Enrichment
MF	GO:0008318	protein prenyltransferase activity	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0051920	peroxiredoxin activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007811	RPC4	432	504

External Links

No external refs found!