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  5. Cz12g09100.t1

Cz12g09100.t1


Description : TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat 1 [Interproscan].


Gene families : OG_01_0002316 (OrthoFinder) Phylogenetic Tree(s): OG0002316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g09100.t1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Cre16.g681578 30778263, APC8 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder
OT_07G02580.1 No alias Tetratricopeptide repeat; Cdc23 [Interproscan]. 0.02 OrthoFinder
Sro40_g024680.1 Contig335.g4475 Cell division cycle 0.02 OrthoFinder
Vocar.0074s0005.1 32899260 Cdc23 [Interproscan]. 0.03 OrthoFinder
XM_003057774.1 MicpuC2_15779, 15779 Tetratricopeptide repeat; Cdc23 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000145 exocyst IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019734 TPR_repeat 352 378
IPR001440 TPR_1 213 245
No external refs found!