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  5. Cpa|evm.model.tig00001086.11

Cpa|evm.model.tig00001086.11 (tig00001086_g6846.t1)


Aliases : tig00001086_g6846.t1

No description available


Gene families : OG_01_0001328 (OrthoFinder) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001086.11
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Sro112_g055500.1 Contig1575.g14275 Sensor kinase/phosphatase LuxQ 0.02 OrthoFinder
Sro1705_g292400.1 Contig4149.g31668 Hypothetical protein 0.02 OrthoFinder
Sro2335_g323820.1 Contig3717.g28592 Autoinducer 1 sensor kinase/phosphatase LuxN 0.02 OrthoFinder
Sro363_g126940.1 Contig698.g8133 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro394_g133870.1 Contig4153.g31717 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro915_g219740.1 Contig3226.g25524 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro96_g049610.1 Contig3763.g28887 Respiration control sensor protein ArcB 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 689 800
IPR003594 HATPase_C 402 445
No external refs found!