Cz12g02110.t1


Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g02110.t1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020685.31 tig00020685_g12947.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020902.3 tig00020902_g14946.t1 ABC transporter G family member 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cz09g11220.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Cz11g07110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.05 OrthoFinder
EOD28242 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro16_g011820.1 Contig916.g9619 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
SymbC1.scaffold4237.3 4237.3 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54121 54121 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56456 56456 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_61805 61805 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_002505455.1 MICPUN_103799, 103799 ATP-binding cassette superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 481 692
IPR003439 ABC_transporter-like_ATP-bd 156 311
No external refs found!