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  5. Cz12g02040.t1

Cz12g02040.t1


Description : Replication factor A protein 3 [Interproscan].


Gene families : OG_01_0007168 (OrthoFinder) Phylogenetic Tree(s): OG0007168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g02040.t1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.65 tig00000718_g3737.t1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.04 OrthoFinder
OT_07G02780.1 No alias Replication factor A protein 3 [Interproscan]. 0.04 OrthoFinder
Vocar.0018s0055.1 32898699 Replication factor A protein 3 [Interproscan]. 0.07 OrthoFinder
XM_002499599.1 MICPUN_107716, 107716 Replication factor A protein 3 [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR013970 Rfa2 5 97
No external refs found!