Cz12g01180.t1


Description : Aminoacyl-tRNA synthetase, class Ia; Zinc finger, FPG/IleRS-type; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding [Interproscan].


Gene families : OG_01_0002127 (OrthoFinder) Phylogenetic Tree(s): OG0002127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz12g01180.t1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000630.10 tig00000630_g2688.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cre16.g689871 30777522 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.11 OrthoFinder
EOD17331 No alias Putative mitochondrial isoleucine tRNA synthetase [Ensembl]. 0.03 OrthoFinder
OT_04G00410.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.05 OrthoFinder
Sro1081_g239040.1 Contig4556.g34022 Isoleucine--tRNA ligase, mitochondrial (Fragment) 0.04 OrthoFinder
TP01G06840.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.04 OrthoFinder
XM_002504704.1 MICPUN_97914, 97914 Zinc finger, FPG/IleRS-type; Aminoacyl-tRNA synthetase,... 0.06 OrthoFinder
XM_003064595.1 MicpuC2_46060, 46060 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61547.1_195 PRW61547 Isoleucyl-tRNA synthetase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 757 915
IPR002300 aa-tRNA-synth_Ia 79 711
IPR010663 Znf_FPG/IleRS 984 1013
No external refs found!