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  5. Cpa|evm.model.tig00001085.4

Cpa|evm.model.tig00001085.4 (tig00001085_g6945.t1)


Aliases : tig00001085_g6945.t1

Description : Chromatin organisation.histones.H2A-type histone


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001085.4
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
EOD14007 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
SymbC1.scaffold415.10 415.10 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
TP05G07700.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0001s0459.1 32885662 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
lcl|BLLF01003345.1_cds_GFH27088.1_21565 HaLaN_25351, GFH27088 Histone H2A 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 95 128
IPR007125 Histone_H2A/H2B/H3 6 92
No external refs found!