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  5. Cz11g28020.t1

Cz11g28020.t1


Description : Ubiquitin-like domain [Interproscan].


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz11g28020.t1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre06.g273600 30779902, RPS27a Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Dusal.0814s00004.1 33191920 Ubiquitin-associated domain; Ubiquitin-like domain... 0.02 OrthoFinder
OT_07G00910.1 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.02 OrthoFinder
OT_08G01740.1 No alias Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.03 OrthoFinder
PTI_07G02070.1 No alias Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. 0.02 OrthoFinder
Sro305_g112730.1 Contig560.g7114 Polyubiquitin (Fragment) 0.04 OrthoFinder
Sro490_g153470.1 Contig328.g4367 Polyubiquitin (Fragment) 0.04 OrthoFinder
Vocar.0024s0156.1 32890529 Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
XM_002501154.1 MICPUN_90428, 90428 Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. 0.03 OrthoFinder
XM_003058637.1 MicpuC2_17541, 17541 Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56057.1_9988 PRW56057 Polyubiquitin 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 65
No external refs found!