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  5. Cz11g23240.t1

Cz11g23240.t1


Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz11g23240.t1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Dusal.0048s00039.1 33189457 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0152s00006.1 33186191 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0745s00004.1 33193322 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57004 57004 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_90701 90701 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0054.1 32891060 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0055.1 32891143 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_002505496.1 MICPUN_95759, 95759 Chlorophyll a/b-binding protein CP26, chloroplast... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61582.1_286 PRW61582 Cytochrome b-c1 complex subunit Rieske-mitochondrial 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57333.1_9090 PRW57333 Chlorophyll a b-binding apo CP26 precursor 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
MF GO:0009976 tocopherol cyclase activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 198 372
No external refs found!