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  5. Cz11g22200.t1

Cz11g22200.t1


Description : Protein of unknown function DUF3007 [Interproscan].


Gene families : OG_01_0003245 (OrthoFinder) Phylogenetic Tree(s): OG0003245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz11g22200.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Sro103_g052270.1 Contig308.g4024 Protein of unknown function (DUF3007) 0.01 OrthoFinder
Transcript_contig_59045 59045 Protein of unknown function DUF3007 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR021562 DUF3007 46 141
No external refs found!