1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz11g03220.t1

Cz11g03220.t1


Description : 60s Acidic ribosomal protein [Interproscan].


Gene families : OG_01_0002401 (OrthoFinder) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz11g03220.t1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.75 tig00020830_g14458.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cre02.g143050 30785883, RPP2 Protein biosynthesis.cytosolic ribosome.large subunit... 0.41 OrthoFinder
Dusal.0521s00007.1 33197388 60s Acidic ribosomal protein [Interproscan]. 0.06 OrthoFinder
EOD22996 No alias 60s Acidic ribosomal protein [Interproscan]. 0.12 OrthoFinder
OT_15G02430.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.08 OrthoFinder
PTI_20G01490.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.28 OrthoFinder
PTI_21G02280.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.2 OrthoFinder
TP02G00810.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.03 OrthoFinder
TP08G04160.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.17 OrthoFinder
Vocar.0054s0034.1 32894621 60s Acidic ribosomal protein [Interproscan]. 0.16 OrthoFinder
XM_002504932.1 MICPUN_106274, 106274 60s Acidic ribosomal protein [Interproscan]. 0.29 OrthoFinder
lcl|BLLF01002106.1_cds_GFH22715.1_17192 HaLaN_20224, GFH22715 60S acidic ribosomal protein P2 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34006.1_2819 PRW34006 60S acidic ribosomal P2 0.12 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494472.1_3002 KAA8494472 60S acidic ribosomal protein P2 0.2 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494747.1_3277 KAA8494747 60S acidic ribosomal protein P2 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!