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  5. Cz10g27060.t1

Cz10g27060.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001969 (OrthoFinder) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g27060.t1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.46 tig00000704_g3333.t1 Cilia- and flagella-associated protein 52... 0.02 OrthoFinder
Cre17.g728650 30782375, FAP196 Cilia- and flagella-associated protein 52... 0.02 OrthoFinder
EOD22832 No alias WD40 repeat-containing protein [Ensembl]. 0.02 OrthoFinder
EOD25992 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0016s0100.1 32898108 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002500050.1 MICPUN_104754, 104754 Partial 0.02 OrthoFinder
XM_003063079.1 MicpuC2_71081, 71081 Flagella-associated protein FAP196-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 52 74
IPR001680 WD40_repeat 496 529
IPR001680 WD40_repeat 453 483
No external refs found!