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  5. Cz10g21180.t1

Cz10g21180.t1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001223 (OrthoFinder) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g21180.t1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.30 tig00000144_g9019.t1 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cpa|evm.model.tig00020848.59 tig00020848_g14589.t1 Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder
Cre12.g536550 30792084, ODA9 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cz05g02230.t1 No alias WD40 repeat [Interproscan]. 0.06 OrthoFinder
Vocar.0043s0052.1 32886923 WD40 repeat [Interproscan]. 0.01 OrthoFinder
XM_002503421.1 MICPUN_83829, 83829 Dynein, 78 kDa intermediate chain, flagellar outer arm (ODA9) 0.03 OrthoFinder
XM_003055617.1 MicpuC2_50559, 50559 Flagellar outer dynein arm intermediate chain 1 (ODA-IC1) 0.03 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13531.1_8008 HaLaN_09431, GFH13531 Dynein, 78 kDa intermediate chain, flagellar outer arm 0.03 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13532.1_8009 HaLaN_09432, GFH13532 Flagellar outer dynein arm intermediate chain 1 0.01 OrthoFinder
lcl|BLLF01003261.1_cds_GFH26850.1_21327 HaLaN_25069, GFH26850 WD_REPEATS_REGION domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45097.1_1957 PRW45097 Wd repeat-containing 78 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 846 883
No external refs found!