1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz10g12260.t1

Cz10g12260.t1


Description : P-loop containing dynein motor region; Dynein heavy chain, domain-2; Dynein heavy chain, AAA 5 extension domain; Dynein heavy chain, coiled coil stalk; Dynein heavy chain, ATP-binding dynein motor region; Dynein heavy chain, hydrolytic ATP-binding dynein motor region; Dynein heavy chain, AAA module D4; Dynein heavy chain, C-terminal domain; Dynein heavy chain AAA lid domain; Dynein heavy chain region D6 P-loop domain; Dynein heavy chain 3, AAA+ lid domain [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g12260.t1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.30 tig00022075_g23593.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre02.g107350 30785387, DHC4 Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder
Cre11.g476050 30775576, ODA2 Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder
Cre12.g555950 30791936, DHC11 Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder
Cre14.g624950 30776158, DHC10 Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder
Dusal.0124s00020.1 33193114 Dynein heavy chain, domain-2 [Interproscan]. 0.03 OrthoFinder
Dusal.0184s00017.1 33197111 Dynein heavy chain, domain-2; Dynein heavy chain,... 0.02 OrthoFinder
Dusal.0531s00001.1 33194997 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.02 OrthoFinder
Dusal.0588s00008.1 33195778 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.03 OrthoFinder
Dusal.0627s00001.1 33192876 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.02 OrthoFinder
Dusal.0686s00003.1 33191472 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.03 OrthoFinder
lcl|BLLF01000014.1_cds_GFH05932.1_409 HaLaN_00477, GFH05932 Dynein heavy chain AAA lid domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000112.1_cds_GFH07737.1_2214 HaLaN_02580, GFH07737 Dynein heavy chain, ATP-binding dynein motor region... 0.02 OrthoFinder
lcl|BLLF01000294.1_cds_GFH10191.1_4668 HaLaN_05460, GFH10191 Dynein-1, subspecies f 0.02 OrthoFinder
lcl|BLLF01000709.1_cds_GFH14291.1_8768 HaLaN_10320, GFH14291 DHC8 protein 0.02 OrthoFinder
lcl|BLLF01000709.1_cds_GFH14293.1_8770 HaLaN_10322, GFH14293 Dynein heavy chain, domain-2 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000732.1_cds_GFH14487.1_8964 HaLaN_10551, GFH14487 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000732.1_cds_GFH14490.1_8967 HaLaN_10554, GFH14490 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000861.1_cds_GFH15512.1_9989 HaLaN_11751, GFH15512 Flagellar alpha dynein 0.03 OrthoFinder
lcl|BLLF01001319.1_cds_GFH18558.1_13035 HaLaN_15384, GFH18558 Dynein heavy chain, ATP-binding dynein motor region;... 0.02 OrthoFinder
lcl|BLLF01001980.1_cds_GFH22159.1_16636 HaLaN_19578, GFH22159 Dynein heavy chain, AAA module D4; Dynein heavy chain... 0.03 OrthoFinder
lcl|BLLF01002126.1_cds_GFH22801.1_17278 HaLaN_20317, GFH22801 Dynein heavy chain, domain-2 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01006708.1_cds_GFH32489.1_26966 HaLaN_31717, GFH32489 Dynein heavy chain, hydrolytic ATP-binding dynein motor... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR041658 AAA_lid_11 3736 3901
IPR035699 AAA_6 1429 1755
IPR035706 AAA_9 3148 3369
IPR013602 Dynein_heavy_linker 879 1287
IPR041589 DNAH3_AAA_lid_1 2347 2436
IPR041228 Dynein_C 3908 4227
IPR041466 Dynein_AAA5_ext 1987 2129
IPR024317 Dynein_heavy_chain_D4_dom 2504 2762
IPR004273 Dynein_heavy_D6_P-loop 3615 3735
IPR024743 Dynein_HC_stalk 2776 3118
No external refs found!