1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz10g05130.t1

Cz10g05130.t1


Description : WD40 repeat; Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0001635 (OrthoFinder) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g05130.t1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre01.g053850 30788730 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre02.g085050 30785833 E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0161s00011.1 33201290 WD40 repeat [Interproscan]. 0.02 OrthoFinder
OT_10G03400.1 No alias Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Vocar.0028s0192.1 32895671 WD40 repeat; Zinc finger, C3HC4 type (RING finger)... 0.03 OrthoFinder
XM_003055076.1 MicpuC2_50551, 50551 Response regulator receiver/WD40 domain fusion protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 915 952
IPR001680 WD40_repeat 828 864
IPR001680 WD40_repeat 741 780
No external refs found!