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  5. Cz10g03130.t1

Cz10g03130.t1


Description : Actin family [Interproscan].


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz10g03130.t1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000319.25 tig00000319_g24138.t1 Cytoskeleton.microfilament network.actin filament protein 0.01 OrthoFinder
Cre08.g382590 30773758 Actin-related protein 6 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
EOD13905 No alias Actin family [Interproscan]. 0.02 OrthoFinder
EOD18610 No alias Actin family [Interproscan]. 0.02 OrthoFinder
OT_04G02610.1 No alias Actin family [Interproscan]. 0.03 OrthoFinder
PTI_03G04390.1 No alias Actin family [Interproscan]. 0.02 OrthoFinder
Sro61_g034960.1 Contig3112.g24749 Actin-66 (Fragment) 0.02 OrthoFinder
Transcript_contig_10957 10957 Actin family [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000228 nuclear chromosome IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR004000 Actin 3 368
No external refs found!