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  4. Sequence
  5. Cz09g32220.t1

Cz09g32220.t1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g32220.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.69 tig00000158_g10175.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000319.12 tig00000319_g24123.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000950.13 tig00000950_g5769.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020684.6 tig00020684_g12854.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00021017.21 tig00021017_g17196.t1 No description available 0.04 OrthoFinder
EOD21978 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD24009 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
OT_13G02020.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold178.6 178.6 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Vocar.0027s0070.1 32887136 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003055570.1 MicpuC2_38033, 38033 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003060440.1 MicpuC2_60365, 60365 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 89 132
No external refs found!