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  5. Cz09g32110.t1

Cz09g32110.t1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g32110.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cz09g32100.t1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Sro492_g153770.1 Contig2481.g20303 Protein ligase ZNRF3 0.01 OrthoFinder
TP07G01800.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55456 55456 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56851 56851 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0082.1 32884580 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0009.1 32888037 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003063325.1 MicpuC2_36262, 36262 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003063326.1 MicpuC2_48778, 48778 Hypothetical protein 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499741.1_8694 KAA8499741 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 94 135
No external refs found!