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  5. Cpa|evm.model.tig00001065.17

Cpa|evm.model.tig00001065.17 (tig00001065_g6718.t1)


Aliases : tig00001065_g6718.t1

Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT4 component


Gene families : OG_01_0002651 (OrthoFinder) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001065.17
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Dusal.1227s00001.1 33191873 RING/Ubox like zinc-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492195.1_5378 KAA8492195 CCR4-NOT transcription complex subunit 4 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!