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  5. Cz09g32010.t1

Cz09g32010.t1


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002875 (OrthoFinder) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g32010.t1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 tig00001339_g8261.t1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder
Cre26.g756797 30778304 Protein degradation.26S proteasome.20S core... 0.15 OrthoFinder
Dusal.0321s00008.1 33203157 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
EOD11720 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
EOD17403 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
OT_08G04050.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_00G00010.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
Sro1228_g254360.1 Contig2695.g21737 Proteasome subunit beta type-1 0.14 OrthoFinder
Sro335_g119990.1 Contig3868.g29756 Proteasome subunit beta type-1 0.16 OrthoFinder
TP01G00130.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
Vocar.0014s0257.1 32888681 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002501730.1 MICPUN_81202, 81202 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
XM_003058479.1 MicpuC2_17183, 17183 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002663.1_cds_GFH24902.1_19379 HaLaN_22779, GFH24902 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20914.1_5022 PRW20914 Proteasome subunit beta type-1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494675.1_3205 KAA8494675 Proteasome subunit beta type-1 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 2 142
No external refs found!