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  5. Cz09g30150.t1

Cz09g30150.t1


Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain; NVL2, nucleolin binding domain [Interproscan].


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g30150.t1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
EOD13062 No alias Cell division cycle protein 48 [Ensembl]. 0.02 OrthoFinder
PTI_27G01230.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
PTI_33G00060.1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
XM_003057401.1 MicpuC2_32537, 32537 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56943.1_9029 PRW56943 Peroxisome biogenesis 1 isoform X1 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57417.1_8902 PRW57417 Ribosome biogenesis ATPase RIX7 0.03 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21077.1_4820 PRW21077 Peroxisome biogenesis 6 0.03 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18391.1_5820 PRW18391 Cell division cycle 48-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009719 response to endogenous stimulus IEP Enrichment
BP GO:0009725 response to hormone IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 577 612
IPR041569 AAA_lid_3 950 977
IPR031996 NVL2_nucleolin-bd 12 72
IPR003959 ATPase_AAA_core 385 553
IPR003959 ATPase_AAA_core 785 915
No external refs found!