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  5. Cz09g29020.t1

Cz09g29020.t1


Description : Cullin protein, neddylation domain; Cullin, N-terminal [Interproscan].


Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g29020.t1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.110 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000157.111 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020563.191 tig00020563_g11392.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre07.g324050 30775299, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder
Cre12.g516500 30793341, CUL2 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder
Dusal.0147s00015.1 33195537 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Dusal.0203s00008.1 33199265 Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
Dusal.1960s00001.1 33187634 Cullin, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD28143 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.02 OrthoFinder
EOD28450 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.02 OrthoFinder
OT_07G00170.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
TP05G00980.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.01 OrthoFinder
TP11G00740.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
TP20G01090.1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.01 OrthoFinder
Transcript_contig_54536 54536 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Vocar.0003s0198.1 32889269 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
XM_002501559.1 MICPUN_106836, 106836 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
XM_002504697.1 MICPUN_84769, 84769 Cullin protein, neddylation domain; Cullin, N-terminal... 0.06 OrthoFinder
XM_003062494.1 MicpuC2_45869, 45869 Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
lcl|BLLF01004981.1_cds_GFH30551.1_25028 HaLaN_29427, GFH30551 CULLIN_2 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20903.1_5012 PRW20903 Cullin-1 0.02 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20452.1_5392 PRW20452 Cullin family 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016556 mRNA modification IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0080009 mRNA methylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 627 689
IPR001373 Cullin_N 1 600
No external refs found!