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  5. Cz09g26150.t1

Cz09g26150.t1


Description : Clp ATPase, C-terminal; ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g26150.t1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467575 30775868 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre12.g533351 30793290 Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder
EOD25362 No alias ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,... 0.01 OrthoFinder
OT_01G00710.1 No alias ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.06 OrthoFinder
Sro1170_g248780.1 Contig3531.g27307 Protein ClpB 0.02 OrthoFinder
Vocar.0009s0368.1 32893246 Orc1-like, AAA ATPase domain; ClpA/ClpB, AAA lid domain;... 0.03 OrthoFinder
Vocar.0034s0036.1 32893002 ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp... 0.02 OrthoFinder
lcl|BLLF01000357.1_cds_GFH10899.1_5376 HaLaN_06299, GFH10899 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01000817.1_cds_GFH15187.1_9664 HaLaN_11369, GFH15187 ClpA/ClpB, AAA lid domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001414.1_cds_GFH19150.1_13627 HaLaN_16053, GFH19150 ATPase, AAA-type, core [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 163 251
IPR019489 Clp_ATPase_C 742 821
IPR041546 ClpA/ClpB_AAA_lid 304 394
IPR003959 ATPase_AAA_core 572 734
No external refs found!