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  5. Cz09g19070.t1

Cz09g19070.t1


Description : Hypothetical protein


Gene families : OG_01_0002464 (OrthoFinder) Phylogenetic Tree(s): OG0002464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g19070.t1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021179.21 tig00021179_g19236.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
OT_07G01850.1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
PTI_01G11550.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Sro382_g131180.1 Contig4152.g31702 SnoRNP-associated protein-like EMB2271 0.07 OrthoFinder
TP04G04770.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Transcript_contig_3007 3007 Hypothetical protein 0.02 OrthoFinder
XM_002503879.1 MICPUN_60028, 60028 U3 snornp-associated-like WD40 repeat-containing protein 0.04 OrthoFinder
XM_003054970.1 MicpuC2_50325, 50325 U3 snornp-associated-like WD40 repeat-containing protein 0.03 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20874.1_5038 PRW20874 U3 small nucleolar RNA-interacting 2 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498077.1_7030 KAA8498077 U3 snoRNP-associated protein-like YAOH 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!