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  5. Cz09g18150.t1

Cz09g18150.t1


Description : DNA mismatch repair protein, S5 domain 2-like; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL, C-terminal, dimerisation [Interproscan].


Gene families : OG_01_0000591 (OrthoFinder) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g18150.t1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.93 tig00000057_g112.t1 DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020610.82 tig00020610_g12029.t1 DNA damage response.DNA repair mechanisms.mismatch... 0.02 OrthoFinder
Cre01.g036050 30789431, MLH1 DNA damage response.DNA repair mechanisms.mismatch... 0.02 OrthoFinder
Cre04.g227000 30791345 DNA damage response.DNA repair mechanisms.mismatch... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR014790 MutL_C 1155 1218
IPR014790 MutL_C 944 1021
IPR013507 DNA_mismatch_S5_2-like 223 342
No external refs found!