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  5. Cz09g17240.t1

Cz09g17240.t1


Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g17240.t1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.95 tig00020629_g12416.t1 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre06.g292800 30779532 Protein degradation.peptide... 0.03 OrthoFinder
OT_05G02570.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
PTI_09G03720.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.04 OrthoFinder
Sro2183_g318050.1 Contig2199.g18316 Conjugating enzyme E2 0.05 OrthoFinder
TP04G07610.1 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Enrichment
MF GO:0008409 5'-3' exonuclease activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 148
No external refs found!