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  5. Cz09g13170.t1

Cz09g13170.t1


Description : Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0002568 (OrthoFinder) Phylogenetic Tree(s): OG0002568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g13170.t1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000802.46 tig00000802_g4296.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00000802.47 tig00000802_g4296.t1 26S proteasome non-ATPase regulatory subunit 13 homolog... 0.08 OrthoFinder
Cre17.g734516 30782173, RPN9 Protein degradation.26S proteasome.regulatory... 0.15 OrthoFinder
EOD30863 No alias Proteasome component (PCI) domain [Interproscan]. 0.09 OrthoFinder
OT_14G00950.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
PTI_06G05030.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.13 OrthoFinder
Sro792_g203100.1 Contig385.g5178 ATPase regulatory subunit 13 0.16 OrthoFinder
TP01G09890.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.1 OrthoFinder
Transcript_contig_59644 59644 Hypothetical protein 0.01 OrthoFinder
XM_002505509.1 MICPUN_87774, 87774 Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
XM_003063621.1 MicpuC2_44969, 44969 Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000285.1_cds_GFH10070.1_4547 HaLaN_05319, GFH10070 PCI domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59228.1_7066 PRW59228 26S proteasome non-ATPase regulatory subunit 13 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 239 345
No external refs found!