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  5. Cz09g08170.t1

Cz09g08170.t1


Description : Ribosomal protein L18 [Interproscan].


Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g08170.t1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre01.g052100 30788991, PRPL18 Protein biosynthesis.organelle translation... 0.25 OrthoFinder
Dusal.0423s00013.1 33192022 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
EOD04622 No alias Ribosomal protein L18 [Interproscan]. 0.01 OrthoFinder
EOD29973 No alias Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
OT_07G04560.1 No alias Ribosomal protein L18 [Interproscan]. 0.16 OrthoFinder
Sro51_chlor_g029630.1 Rpl18 Rpl18 0.07 OrthoFinder
SymbC1.scaffold436.6 436.6 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
TPCG02610.1 No alias Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
Vocar.0001s0412.1 32884219 Ribosomal protein L18 [Interproscan]. 0.09 OrthoFinder
XM_002503130.1 MICPUN_59217, 59217 Ribosomal protein L18 (RPL18.1) 0.14 OrthoFinder
XM_003061146.1 MicpuC2_28274, 28274 Ribosomal protein L18 [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56666.1_9892 PRW56666 50S ribosomal L18 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 39 155
No external refs found!