Cz08g32120.t1


Description : Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].


Gene families : OG_01_0003545 (OrthoFinder) Phylogenetic Tree(s): OG0003545_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g32120.t1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.33 tig00000217_g19167.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder
Cre16.g676650 30776926, AP1G1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder
EOD12161 No alias Gamma-adaptin [Ensembl]. 0.05 OrthoFinder
PTI_11G00930.1 No alias Clathrin adaptor, alpha/beta/gamma-adaptin, appendage,... 0.02 OrthoFinder
Sro196_g083470.1 Contig3206.g25343 AP-1 complex subunit gamma-1 0.11 OrthoFinder
TP14G01080.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
Transcript_contig_55103 55103 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
Vocar.0018s0044.1 32898516 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage,... 0.04 OrthoFinder
XM_002504775.1 MICPUN_62316, 62316 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 23 577
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 726 840
No external refs found!