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  5. Cz08g32050.t1

Cz08g32050.t1


Description : Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan].


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g32050.t1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.67 tig00000076_g2367.t1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00021312.11 tig00021312_g20047.t1 G2/mitotic-specific cyclin S13-6 OS=Glycine max 0.03 OrthoFinder
EOD13446 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
TP10G00850.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495714.1_1712 KAA8495714 G2/mitotic-specific cyclin-A 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492954.1_2690 KAA8492954 Cyclin-B2-2 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 103 227
IPR004367 Cyclin_C-dom 230 359
No external refs found!