- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Interproscan].
Gene families : OG_01_0000966 (OrthoFinder) Phylogenetic Tree(s): OG0000966_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz08g29040.t1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold2818.2 | 2818.2 | Hypothetical protein | 0.01 | OrthoFinder | |
| Vocar.0001s0200.1 | 32885099 | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase... | 0.02 | OrthoFinder | |
| lcl|VRMN01000009.1_cds_KAA8492386.1_9079 | KAA8492386 | Cytosolic purine 5'-nucleotidase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
| MF | GO:0004470 | malic enzyme activity | IEP | Enrichment |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0005534 | galactose binding | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0042393 | histone binding | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Enrichment |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008380 | HAD-SF_hydro_IG_5-nucl | 1 | 481 |
| No external refs found! |