Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz08g26140.t1 | |
Cluster | HCCA: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dusal.0048s00039.1 | 33189457 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
Dusal.0152s00006.1 | 33186191 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
Dusal.3971s00001.1 | 33198839 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_57004 | 57004 | Hypothetical protein | 0.02 | OrthoFinder | |
Transcript_contig_90701 | 90701 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0002s0055.1 | 32891143 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
XM_002500065.1 | MICPUN_104750, 104750 | Prasinophyte specific chlorophyll a/b-binding protein (LHCP2.7) | 0.02 | OrthoFinder | |
XM_002505496.1 | MICPUN_95759, 95759 | Chlorophyll a/b-binding protein CP26, chloroplast... | 0.02 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61582.1_286 | PRW61582 | Cytochrome b-c1 complex subunit Rieske-mitochondrial | 0.04 | OrthoFinder | |
lcl|LHPG02000007.1_cds_PRW57333.1_9090 | PRW57333 | Chlorophyll a b-binding apo CP26 precursor | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004470 | malic enzyme activity | IEP | Enrichment |
MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Enrichment |
CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006952 | defense response | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
MF | GO:0016615 | malate dehydrogenase activity | IEP | Enrichment |
MF | GO:0016851 | magnesium chelatase activity | IEP | Enrichment |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Enrichment |
MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Enrichment |
BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
BP | GO:0051260 | protein homooligomerization | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 143 | 327 |
No external refs found! |