Cpa|evm.model.tig00001049.14 (tig00001049_g6664.t1)


Aliases : tig00001049_g6664.t1

Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG_01_0000899 (OrthoFinder) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001049.14
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre12.g520650 30792471, TLP1 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder
TP15G02320.1 No alias Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000007 Tubby_C 151 266
IPR000007 Tubby_C 287 331
No external refs found!