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  5. Cpa|evm.model.tig00001042.7

Cpa|evm.model.tig00001042.7 (tig00001042_g6584.t1)


Aliases : tig00001042_g6584.t1

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001042.7
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre02.g108350 30786333 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cre09.g397475 30781407 No description available 0.02 OrthoFinder
Cre14.g609350 30776287 No description available 0.01 OrthoFinder
OT_13G00110.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_78900 78900 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44975.1_1767 PRW44975 Transcription factor MYB44-like 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 41 81
IPR001005 SANT/Myb 328 373
No external refs found!