Aliases : tig00001042_g6583.t1
Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component
Gene families : OG_01_0002743 (OrthoFinder) Phylogenetic Tree(s): OG0002743_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00001042.6 | |
Cluster | HCCA: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre07.g329700 | 30774542, RPT2 | Protein degradation.26S proteasome.regulatory... | 0.15 | OrthoFinder | |
Cz14g00180.t1 | No alias | AAA ATPase, AAA+ lid domain; Proteasomal ATPase OB... | 0.07 | OrthoFinder | |
EOD19750 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.02 | OrthoFinder | |
EOD21334 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.08 | OrthoFinder | |
PTI_03G00970.1 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.11 | OrthoFinder | |
Sro35_g022630.1 | Contig3323.g26140 | 26S proteasome regulatory subunit 4 | 0.17 | OrthoFinder | |
TP01G06520.1 | No alias | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.11 | OrthoFinder | |
Transcript_contig_56893 | 56893 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.05 | OrthoFinder | |
Vocar.0017s0200.1 | 32891504 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.09 | OrthoFinder | |
XM_002501574.1 | MICPUN_106840, 106840 | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.09 | OrthoFinder | |
XM_003062509.1 | MicpuC2_49715, 49715 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.07 | OrthoFinder | |
lcl|BLLF01000228.1_cds_GFH09364.1_3841 | HaLaN_04486, GFH09364 | 26S proteasome regulatory subunit | 0.03 | OrthoFinder | |
lcl|LHPG02000006.1_cds_PRW57564.1_8566 | PRW57564 | 26S proteasome regulatory subunit 4-like protein B | 0.02 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492200.1_5383 | KAA8492200 | 26S proteasome regulatory subunit 4-like B | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | Enrichment |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
BP | GO:0006096 | glycolytic process | IEP | Enrichment |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0010921 | regulation of phosphatase activity | IEP | Enrichment |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Enrichment |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
MF | GO:0019899 | enzyme binding | IEP | Enrichment |
MF | GO:0019902 | phosphatase binding | IEP | Enrichment |
MF | GO:0019903 | protein phosphatase binding | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0031399 | regulation of protein modification process | IEP | Enrichment |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
BP | GO:0035303 | regulation of dephosphorylation | IEP | Enrichment |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Enrichment |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No external refs found! |