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  5. Cz08g17010.t1

Cz08g17010.t1


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0002071 (OrthoFinder) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g17010.t1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.21 tig00000217_g19154.t1 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.05 OrthoFinder
Cre06.g304300 30779553, POA6 Protein degradation.26S proteasome.20S core... 0.1 OrthoFinder
Dusal.0164s00016.1 33198387 Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
EOD07672 No alias Proteasome alpha-subunit, N-terminal domain [Interproscan]. 0.04 OrthoFinder
PTI_08G04270.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.09 OrthoFinder
PTI_08G04350.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.08 OrthoFinder
Sro17_g012260.1 Contig269.g3405 Proteasome subunit alpha type-1 0.13 OrthoFinder
SymbC1.scaffold4308.2 4308.2 Proteasome, subunit alpha/beta; Proteasome... 0.01 OrthoFinder
TP06G02620.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.09 OrthoFinder
Transcript_contig_58532 58532 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.01 OrthoFinder
Vocar.0020s0163.1 32886732 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
lcl|BLLF01000544.1_cds_GFH12831.1_7308 HaLaN_08589, GFH12831 Proteasome subunit alpha type 0.02 OrthoFinder
lcl|BLLF01001219.1_cds_GFH17897.1_12374 HaLaN_14620, GFH17897 Proteasome endopeptidase complex 0.02 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32598.1_4029 PRW32598 Proteasome subunit alpha type-1-B-like isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045765 regulation of angiogenesis IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051239 regulation of multicellular organismal process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901342 regulation of vasculature development IEP Enrichment
BP GO:2000026 regulation of multicellular organismal development IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 214
IPR000426 Proteasome_asu_N 6 28
No external refs found!