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  5. Cz08g16240.t1

Cz08g16240.t1


Description : WD40 repeat; HELP [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g16240.t1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
XM_002499921.1 MICPUN_99060, 99060 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01007604.1_cds_GFH33025.1_27502 HaLaN_32336, GFH33025 WD_REPEATS_REGION domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005108 HELP 430 504
IPR001680 WD40_repeat 515 541
IPR001680 WD40_repeat 1253 1289
No external refs found!