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  5. Cz08g14050.t1

Cz08g14050.t1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g14050.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.69 tig00000158_g10175.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020684.6 tig00020684_g12854.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Dusal.0110s00028.1 33194367 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Dusal.0652s00001.1 33198111 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_09G00300.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.02 OrthoFinder
Sro494_g154270.1 Contig3119.g24792 Receptor homology region, transmembrane domain- and RING... 0.01 OrthoFinder
SymbC1.scaffold5269.2 5269.2 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0398.1 32884606 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016093 polyprenol metabolic process IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
BP GO:0019348 dolichol metabolic process IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 194 236
No external refs found!