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  5. Cz08g13130.t1

Cz08g13130.t1


Description : Ribosomal protein L22/L17 [Interproscan].


Gene families : OG_01_0005913 (OrthoFinder) Phylogenetic Tree(s): OG0005913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g13130.t1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre13.g580850 30784623 Protein biosynthesis.organelle translation... 0.32 OrthoFinder
Dusal.0145s00018.1 33195880 Ribosomal protein L22/L17 [Interproscan]. 0.03 OrthoFinder
OT_18G00670.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.18 OrthoFinder
Sro51_chlor_g029530.1 Rpl22 Rpl22 0.08 OrthoFinder
TPCG02430.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.1 OrthoFinder
Vocar.0002s0583.1 32890565 Ribosomal protein L22/L17 [Interproscan]. 0.04 OrthoFinder
XM_002501086.1 MICPUN_105354, 105354 Ribosomal protein L22/L17 [Interproscan]. 0.23 OrthoFinder
XM_003064504.1 MicpuC2_30355, 30355 Ribosomal protein L22/L17 [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58926.1_7517 PRW58926 50S ribosomal L22 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 82 182
No external refs found!