Cz08g10160.t1


Description : Ribosomal protein L47, mitochondrial [Interproscan].


Gene families : OG_01_0003518 (OrthoFinder) Phylogenetic Tree(s): OG0003518_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g10160.t1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre13.g588310 30784218 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Dusal.0172s00004.1 33188492 Ribosomal protein L47, mitochondrial [Interproscan]. 0.02 OrthoFinder
PTI_11G04360.1 No alias Ribosomal protein L47, mitochondrial [Interproscan]. 0.02 OrthoFinder
Sro226_g092030.1 Contig565.g7175 39S ribosomal protein L47, mitochondrial 0.05 OrthoFinder
Vocar.0020s0007.1 32886651 Ribosomal protein L47, mitochondrial [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495723.1_1721 KAA8495723 54S ribosomal protein L4, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005761 mitochondrial ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009264 deoxyribonucleotide catabolic process IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR010729 Ribosomal_L47_mit 44 119
No external refs found!