Cz08g08090.t1

Description : Aminoacyl-tRNA synthetase, class Ia; Methionyl/Leucyl tRNA synthetase; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding; Leucyl-tRNA synthetase, editing domain [Interproscan].

Gene families : OG_01_0001825 (OrthoFinder) Phylogenetic Tree(s): OG0001825_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz08g08090.t1
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000865.51	tig00000865_g5102.t1	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder
Cre13.g578451	30784550	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.07	OrthoFinder
Dusal.0166s00010.1	33188736	Leucyl-tRNA synthetase, editing domain; Aminoacyl-tRNA...	0.02	OrthoFinder
EOD35437	No alias	Leucyl-tRNA synthetase [Ensembl].	0.02	OrthoFinder
OT_06G00490.1	No alias	Aminoacyl-tRNA synthetase, class Ia;...	0.05	OrthoFinder
Sro497_g154690.1	Contig738.g8451	Leucine--tRNA ligase	0.02	OrthoFinder
Sro497_g154690.2	No alias	Methionyl/Leucyl tRNA synthetase; Leucyl-tRNA...	0.03	OrthoFinder
TP03G01360.1	No alias	Aminoacyl-tRNA synthetase, class Ia; Leucyl-tRNA...	0.04	OrthoFinder
Vocar.0001s0129.1	32885622	Aminoacyl-tRNA synthetase, class Ia; Leucyl-tRNA...	0.05	OrthoFinder
XM_003059540.1	MicpuC2_58989, 58989	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,...	0.02	OrthoFinder
lcl\|BLLF01001901.1_cds_GFH21760.1_16237	HaLaN_19124, GFH21760	Hypothetical protein	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497783.1_6736	KAA8497783	Leucine--tRNA ligase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEP	Enrichment
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Enrichment
BP	GO:0006534	cysteine metabolic process	IEP	Enrichment
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Enrichment
BP	GO:0006739	NADP metabolic process	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0007031	peroxisome organization	IEP	Enrichment
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
BP	GO:0009069	serine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009092	homoserine metabolic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0019346	transsulfuration	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
BP	GO:0034311	diol metabolic process	IEP	Enrichment
BP	GO:0034312	diol biosynthetic process	IEP	Enrichment
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Enrichment
BP	GO:0046165	alcohol biosynthetic process	IEP	Enrichment
BP	GO:0046173	polyol biosynthetic process	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
BP	GO:0050667	homocysteine metabolic process	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	819	929
IPR025709	Leu_tRNA-synth_edit	307	519
IPR015413	Methionyl/Leucyl_tRNA_Synth	126	258
IPR002300	aa-tRNA-synth_Ia	747	783

External Links

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Cz08g08090.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation