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  5. Cz08g05160.t1

Cz08g05160.t1


Description : NAD(P)-binding domain; NADH:ubiquinone oxidoreductase intermediate-associated protein 30; NmrA-like domain [Interproscan].


Gene families : OG_01_0000465 (OrthoFinder) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g05160.t1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
PTI_01G05890.1 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
Sro140_g065360.1 Contig1537.g13952 TIC 62, chloroplastic 0.02 OrthoFinder
Transcript_contig_130 130 NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_62084 62084 NAD(P)-binding domain; NADH:ubiquinone oxidoreductase... 0.01 OrthoFinder
XM_002504825.1 MICPUN_103020, 103020 NADH:ubiquinone oxidoreductase intermediate-associated... 0.04 OrthoFinder
XM_003056717.1 MicpuC2_56155, 56155 NADH:ubiquinone oxidoreductase intermediate-associated... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP Enrichment
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Enrichment
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0032422 purine-rich negative regulatory element binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 234 400
IPR016040 NAD(P)-bd_dom 407 510
IPR008030 NmrA-like 92 171
No external refs found!