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  5. Cz08g03010.t1

Cz08g03010.t1


Description : Vps52 [Interproscan].


Gene families : OG_01_0002754 (OrthoFinder) Phylogenetic Tree(s): OG0002754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g03010.t1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre08.g367200 30773844, VPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 OrthoFinder
Dusal.0217s00006.1 33197562 Vps52 [Interproscan]. 0.04 OrthoFinder
OT_12G03190.1 No alias Vps52 [Interproscan]. 0.02 OrthoFinder
Sro301_g111960.1 Contig455.g6144 Protein sorting-associated protein 52 homolog 0.01 OrthoFinder
Vocar.0020s0020.1 32886776 Vps52 [Interproscan]. 0.02 OrthoFinder
XM_002499331.1 MICPUN_56568, 56568 Vps52/Sac2 family protein (POK) 0.02 OrthoFinder
lcl|BLLF01001960.1_cds_GFH22066.1_16543 HaLaN_19473, GFH22066 Vps52 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR007258 Vps52 1 464
No external refs found!