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  5. Cpa|evm.model.tig00001038.12

Cpa|evm.model.tig00001038.12 (tig00001038_g6522.t1)


Aliases : tig00001038_g6522.t1

Description : Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana


Gene families : OG_01_0000259 (OrthoFinder) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001038.12
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.96 tig00000158_g10203.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000158.98 tig00000158_g10203.t2 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000405.12 tig00021504_g21976.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00000658.17 tig00021366_g20838.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00000658.18 tig00020849_g14626.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000788.12 tig00000788_g4072.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00001038.14 tig00000828_g4634.t1 No description available 0.08 OrthoFinder
Cpa|evm.model.tig00001066.2 tig00001066_g6751.t1 No description available 0.07 OrthoFinder
Cpa|evm.model.tig00020734.53 tig00000405_g441.t1 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder
Cpa|evm.model.tig00020848.8 tig00020848_g14533.t1 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder
Cpa|evm.model.tig00021366.5 tig00020849_g14625.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021571.43 tig00021571_g22383.t2 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
InterPro domains Description Start Stop
IPR041373 RT_RNaseH 559 664
IPR041588 Integrase_H2C2 1100 1155
IPR001584 Integrase_cat-core 1171 1278
IPR000477 RT_dom 310 469
No external refs found!