Description : Ribosomal protein S15 [Interproscan].
Gene families : OG_01_0003390 (OrthoFinder) Phylogenetic Tree(s): OG0003390_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz07g16040.t1 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000489.15 | tig00000489_g1374.t1 | 40S ribosomal protein S13 OS=Glycine max | 0.05 | OrthoFinder | |
Cre07.g331900 | 30774339, RPS13 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.35 | OrthoFinder | |
Dusal.0017s00026.1 | 33200512 | Ribosomal protein S15; Ribosomal protein S13/S15,... | 0.19 | OrthoFinder | |
EOD30715 | No alias | Ribosomal protein S15; Ribosomal protein S13/S15,... | 0.11 | OrthoFinder | |
EOD34926 | No alias | 40S ribosomal protein S13 [Ensembl]. | 0.11 | OrthoFinder | |
OT_01G03170.1 | No alias | Ribosomal protein S13/S15, N-terminal; Ribosomal protein... | 0.2 | OrthoFinder | |
PTI_01G02690.1 | No alias | Ribosomal protein S13/S15, N-terminal; Ribosomal protein... | 0.27 | OrthoFinder | |
Sro611_g175300.1 | Contig1882.g16411 | 40S ribosomal protein S13 | 0.3 | OrthoFinder | |
SymbC1.scaffold2720.1 | 2720.1 | Glycosyltransferase, DXD sugar-binding motif; Ribosomal... | 0.05 | OrthoFinder | |
TP04G08460.1 | No alias | Ribosomal protein S15; Ribosomal protein S13/S15,... | 0.19 | OrthoFinder | |
Vocar.0034s0079.1 | 32893040 | Ribosomal protein S15; Ribosomal protein S13/S15,... | 0.01 | OrthoFinder | |
XM_002504263.1 | MICPUN_108906, 108906 | Ribosomal protein S15; Ribosomal protein S13/S15,... | 0.28 | OrthoFinder | |
XM_003063730.1 | MicpuC2_49744, 49744 | Ribosomal protein S13/S15, N-terminal; Ribosomal protein... | 0.1 | OrthoFinder | |
lcl|BLLF01005706.1_cds_GFH31540.1_26017 | HaLaN_30603, GFH31540 | Ribosomal_S13_N domain-containing protein | 0.08 | OrthoFinder | |
lcl|LHPG02000009.1_cds_PRW56017.1_9996 | PRW56017 | 40S ribosomal S13 | 0.05 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495591.1_1589 | KAA8495591 | 40S ribosomal protein S13 | 0.16 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004017 | adenylate kinase activity | IEP | Enrichment |
CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Enrichment |
CC | GO:0043233 | organelle lumen | IEP | Enrichment |
CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
MF | GO:0051920 | peroxiredoxin activity | IEP | Enrichment |
CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000589 | Ribosomal_S15 | 31 | 86 |
No external refs found! |