Cz07g14170.t1

Description : UmuC domain; DNA polymerase, Y-family, little finger domain [Interproscan].

Gene families : OG_01_0001692 (OrthoFinder) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz07g14170.t1
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dusal.1402s00001.1	33188722	DNA polymerase, Y-family, little finger domain [Interproscan].	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	Enrichment
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Enrichment
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Enrichment
MF	GO:0008408	3'-5' exonuclease activity	IEP	Enrichment
BP	GO:0009452	7-methylguanosine RNA capping	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
BP	GO:0032446	protein modification by small protein conjugation	IEP	Enrichment
BP	GO:0036260	RNA capping	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment
MF	GO:0070568	guanylyltransferase activity	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001126	UmuC	392	537
IPR017961	DNA_pol_Y-fam_little_finger	617	744

External Links

No external refs found!

Cz07g14170.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation