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  5. Cz07g09150.t1

Cz07g09150.t1


Description : Retroviral aspartyl protease [Interproscan].


Gene families : OG_01_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g09150.t1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cz03g40130.t1 No alias Reverse transcriptase/retrotransposon-derived protein,... 0.05 OrthoFinder
Cz06g11150.t1 No alias Reverse transcriptase, RNase H-like domain; Integrase... 0.04 OrthoFinder
Cz07g15230.t1 No alias Chromo domain [Interproscan]. 0.04 OrthoFinder
Cz09g23160.t1 No alias Integrase zinc-binding domain; Integrase, catalytic... 0.01 OrthoFinder
Cz15g18080.t1 No alias Chromo domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001218.1_cds_GFH17889.1_12366 HaLaN_14611, GFH17889 Reverse transcriptase, RNase H-like domain; Reverse... 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495183.1_3713 KAA8495183 Transposon Ty3-I Gag-Pol polyprotein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!